WormBase Tree Display for Variation: WBVar00602751
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| WBVar00602751 | Name | Public_name | WBVar00602751 | |||
|---|---|---|---|---|---|---|
| Other_name | oicr_ce1170 | |||||
| cewivar00018433 | ||||||
| T12B5.6c.1:c.114-14T>C | ||||||
| T12B5.6b.1:c.187T>C | ||||||
| CE39403:p.Tyr63His | ||||||
| HGVSg | CHROMOSOME_III:g.934393A>G | |||||
| Sequence_details | SMap | S_parent | Sequence | T12B5 | ||
| Flanking_sequences | TGTCATTTTCTGCTGTATTATATATGATTTCAGTTCCACTCCATATTTCGACTTCATCTTTCCTCAAGTACAAAT | GATGTAGTCAAAACGTAATCCAATTTTATCGACAGCAGTTCTCAAACTGCGACAGACTTTTCTCGCTCTCAGTCT | ||||
| Mapping_target | T12B5 | |||||
| Type_of_mutation | Substitution | a | g | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain (10) | ||||||
| Analysis | WGS_Stein | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | ss477719671 | ||
| Status | Live | |||||
| Affects | Gene | WBGene00020453 | ||||
| Transcript | T12B5.6c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | T12B5.6c.1:c.114-14T>C | |||||
| Intron_number | 2/4 | |||||
| T12B5.6b.1 (12) | ||||||
| Remark | validatation rate is over 97% | |||||
| Method | WGS_Stein |
