WormBase Tree Display for Variation: WBVar00601343

WBVar00601343 Evidence: Paper_evidence: WBPaper00040097
  Name: Public_name: WBVar00601343
    Other_name: LSJ2_62
      T02G5.4:n.1094A>G
    HGVSg: CHROMOSOME_II:g.7083677A>G
  Sequence_details: SMap: S_parent: Sequence: T02G5
    Flanking_sequences: GCTGTCATTCTTGCCTCGCAGGAAGCAGTTTCCGAGCAAAACTTGAAGCC TTGGCCAGAATTTTGGCGTACGGAGATGCCGCCACGCACCAACTCGATTT
    Mapping_target: T02G5
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00026322 From_analysis: WGS_De_Bono
      WBStrain00026323 From_analysis: WGS_McGrath
    Laboratory: CX
      AX
    Analysis: WGS_McGrath
      WGS_De_Bono
    DB_info: Database: dbSNP_ss ss 472333416
        dbSNP_rs rs 193929438
    History: Acquires_merge: WBVar01339530
    Status: Live
  Affects: Gene: WBGene00305577
      WBGene00020164
    Transcript: T02G5.17
    Pseudogene: T02G5.4 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: T02G5.4:n.1094A>G
        cDNA_position: 1094
        Exon_number: 6/7
  Reference: WBPaper00040097
    WBPaper00037807
  Method: WGS_McGrath