WormBase Tree Display for Variation: WBVar00601052
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| WBVar00601052 | Evidence | Paper_evidence | WBPaper00040167 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | gt448 | |||||
| Other_name | C05B10.1b.1:c.508C>T | ||||||
| C05B10.1a.1:c.508C>T | |||||||
| CE31151:p.Arg170Ter | |||||||
| CE49310:p.Arg170Ter | |||||||
| HGVSg | CHROMOSOME_IV:g.6844075C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | C05B10 | |||
| Flanking_sequences | agtagataatttttattttccagccaactc | gattggaaggtgaagatcaaggcggaaaac | |||||
| Mapping_target | C05B10 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00040167 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | TG | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003043 | |||||
| Transcript | C05B10.1b.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C05B10.1b.1:c.508C>T | ||||||
| HGVSp | CE49310:p.Arg170Ter | ||||||
| cDNA_position | 514 | ||||||
| CDS_position | 508 | ||||||
| Protein_position | 170 | ||||||
| Exon_number | 6/11 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| C05B10.1a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | C05B10.1a.1:c.508C>T | ||||||
| HGVSp | CE31151:p.Arg170Ter | ||||||
| cDNA_position | 508 | ||||||
| CDS_position | 508 | ||||||
| Protein_position | 170 | ||||||
| Exon_number | 5/9 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| Genetics | Interpolated_map_position | IV | 3.24351 | ||||
| Reference | WBPaper00040167 | ||||||
| Method | Substitution_allele |
