WormBase Tree Display for Variation: WBVar00595330
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WBVar00595330 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00595330 | |||
Other_name | haw175465 | ||||
cewivar00256958 | |||||
F47H4.2b.1:c.2130T>C | |||||
CE37016:p.Val365= | |||||
F47H4.2a.1:c.1095T>C | |||||
CE46710:p.Val710= | |||||
HGVSg | CHROMOSOME_V:g.17359060T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F47H4 | |
Flanking_sequences | CCAACTAATTATCAAGCTATGAAAAGGATCATAGAAAAGTGCTCCGTTGT | ACAATGTAAGTTTTTTGTTTGGTTATCATATATAAATTCGGAAGTTTCAG | |||
Mapping_target | F47H4 | ||||
Type_of_mutation | Substitution | t | c | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009835 | |||
Transcript | F47H4.2b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F47H4.2b.1:c.2130T>C | ||||
HGVSp | CE46710:p.Val710= | ||||
cDNA_position | 2180 | ||||
CDS_position | 2130 | ||||
Protein_position | 710 | ||||
Exon_number | 8/11 | ||||
Codon_change | gtT/gtC | ||||
Amino_acid_change | V | ||||
F47H4.2a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F47H4.2a.1:c.1095T>C | ||||
HGVSp | CE37016:p.Val365= | ||||
cDNA_position | 1143 | ||||
CDS_position | 1095 | ||||
Protein_position | 365 | ||||
Exon_number | 5/8 | ||||
Codon_change | gtT/gtC | ||||
Amino_acid_change | V | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |