WormBase Tree Display for Variation: WBVar00594481
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WBVar00594481 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00594481 | |||
Other_name | haw174616 | ||||
cewivar00254105 | |||||
T20B3.7.1:c.208+342G>T | |||||
T20B3.2.1:c.704C>A | |||||
CE20087:p.Pro235Gln | |||||
T20B3.7.2:c.208+342G>T | |||||
HGVSg | CHROMOSOME_V:g.16833865G>T | ||||
Sequence_details | SMap | S_parent | Sequence | T20B3 | |
Flanking_sequences | CCTCTTCGGCTTCTGGCTCTTCAGCTGCTGGCTCGGCGGCTTCTGGTTCT | GCTCGGCCTCTGGCTCGACTGGAGCAGCTAGTTCCACTGGTGCAGCCTCT | |||
Mapping_target | T20B3 | ||||
Type_of_mutation | Substitution | g | t | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006585 | |||
WBGene00004026 | |||||
Transcript | T20B3.2.1 (12) | ||||
T20B3.7.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T20B3.7.1:c.208+342G>T | ||||
Intron_number | 3/7 | ||||
T20B3.7.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T20B3.7.2:c.208+342G>T | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |