WormBase Tree Display for Variation: WBVar00577631
expand all nodes | collapse all nodes | view schema
WBVar00577631 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00577631 | |||
Other_name | haw157766 | ||||
cewivar00215562 | |||||
Y105C5A.14:n.881T>C | |||||
Y105C5A.1272.1:c.178A>G | |||||
CE44512:p.Ser60Gly | |||||
HGVSg | CHROMOSOME_IV:g.15647262A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y105C5A | |
Flanking_sequences | CAATCGCTGAGGGTTTCCTCCTTATTGAGGACAATGCCGGTAACCTCCAG | GCCAATTGTTAAGCGGATTCCAACGCGACAAGTGGGTTGTGCAGAACTGA | |||
Mapping_target | Y105C5A | ||||
Type_of_mutation | Substitution | a | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00013638 | |||
WBGene00194913 | |||||
Transcript | Y105C5A.1272.1 (11) | ||||
Pseudogene | Y105C5A.14 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5A.14:n.881T>C | ||||
cDNA_position | 881 | ||||
Exon_number | 4/5 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |