WormBase Tree Display for Variation: WBVar00572503
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WBVar00572503 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00572503 | |||
Other_name | haw152638 | ||||
cewivar00039456 | |||||
CE30173:p.Gly234= | |||||
T12E12.4b.1:c.702G>A | |||||
CE30172:p.Gly234= | |||||
T12E12.4a.1:c.702G>A | |||||
T12E12.4b.2:c.702G>A | |||||
T12E12.4a.2:c.702G>A | |||||
HGVSg | CHROMOSOME_IV:g.5539241G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T12E12 | |
Flanking_sequences | AAATTGGATTTGATGGATCAAGGAACTGATGCGATGGACGTATTAATGGG | AAAGTGATTCCAGTAAAGTTGGGAATTATTGGAGTCGTTAATCGATCTCA | |||
Mapping_target | T12E12 | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (20) | |||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001093 | |||
Transcript | T12E12.4b.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T12E12.4b.2:c.702G>A | ||||
HGVSp | CE30173:p.Gly234= | ||||
cDNA_position | 704 | ||||
CDS_position | 702 | ||||
Protein_position | 234 | ||||
Exon_number | 3/11 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
T12E12.4a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T12E12.4a.1:c.702G>A | ||||
HGVSp | CE30172:p.Gly234= | ||||
cDNA_position | 702 | ||||
CDS_position | 702 | ||||
Protein_position | 234 | ||||
Exon_number | 2/9 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
T12E12.4b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T12E12.4b.1:c.702G>A | ||||
HGVSp | CE30173:p.Gly234= | ||||
cDNA_position | 704 | ||||
CDS_position | 702 | ||||
Protein_position | 234 | ||||
Exon_number | 3/10 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
T12E12.4a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T12E12.4a.2:c.702G>A | ||||
HGVSp | CE30172:p.Gly234= | ||||
cDNA_position | 702 | ||||
CDS_position | 702 | ||||
Protein_position | 234 | ||||
Exon_number | 2/10 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |