WormBase Tree Display for Variation: WBVar00558499
expand all nodes | collapse all nodes | view schema
WBVar00558499 | Name | Public_name | WBVar00558499 | ||
---|---|---|---|---|---|
Other_name | haw138634 | ||||
cewivar00190956 | |||||
CE19706:p.Leu37= | |||||
C29F9.7.1:c.109T>C | |||||
HGVSg | CHROMOSOME_III:g.94133A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C29F9 | |
Flanking_sequences | TGAGAAGGCGTGATCGTCTCCGACGTTGAGATCGTGCTCGTGATCGTCCA | CCAGACGCGGACCTGAAATTTTGATAGTAGTCTTAGTCTATAGTAAGGAT | |||
Mapping_target | C29F9 | ||||
Type_of_mutation | Substitution | a | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01387815 | |||
Status | Live | ||||
Affects | Gene | WBGene00003931 | |||
Transcript | C29F9.7.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C29F9.7.1:c.109T>C | ||||
HGVSp | CE19706:p.Leu37= | ||||
cDNA_position | 115 | ||||
CDS_position | 109 | ||||
Protein_position | 37 | ||||
Exon_number | 3/10 | ||||
Codon_change | Ttg/Ctg | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |