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WormBase Tree Display for Variation: WBVar00558470

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Name Class

WBVar00558470NamePublic_nameWBVar00558470
Other_namehaw138605
cewivar00190879
CE19706:p.Ala420=
C29F9.7.1:c.1260T>C
HGVSgCHROMOSOME_III:g.89784A>G
Sequence_detailsSMapS_parentSequenceC29F9
Flanking_sequencesTTCATATTACGGGCGATTCCAGGGGGAATGTGCACTCGGAGACCTTCCAGGCGATCTGAAATTAATAAATTTGGATTCAGCGTGAAATTTGGGTCTGGAA
Mapping_targetC29F9
Type_of_mutationSubstitutionag
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
PersonWBPerson4037
AnalysisWGS_Yanai
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01387750
StatusLive
AffectsGeneWBGene00003931
TranscriptC29F9.7.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC29F9.7.1:c.1260T>C
HGVSpCE19706:p.Ala420=
cDNA_position1266
CDS_position1260
Protein_position420
Exon_number9/10
Codon_changegcT/gcC
Amino_acid_changeA
ReferenceWBPaper00038208
WBPaper00037807
MethodWGS_Yanai