WormBase Tree Display for Variation: WBVar00558334
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WBVar00558334 | Name | Public_name | WBVar00558334 | ||
---|---|---|---|---|---|
Other_name | haw138469 | ||||
cewivar00190556 | |||||
CE19610:p.Val102= | |||||
W05G11.6.1:c.306G>C | |||||
HGVSg | CHROMOSOME_III:g.65390C>G | ||||
Sequence_details | SMap | S_parent | Sequence | F54C4 | |
Flanking_sequences | GAGTCGTACTTGTCCTTGGTGACCATCCAGGTTTTGGACTCGACGCGGGC | ACATCACGTGGGTCGGTACGGCAGAGGTAGCTGGAAATTTTATCGAGTTT | |||
Mapping_target | F54C4 | ||||
Type_of_mutation | Substitution | c | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01387484 | |||
Status | Live | ||||
Affects | Gene | WBGene00021043 | |||
Transcript | W05G11.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | W05G11.6.1:c.306G>C | ||||
HGVSp | CE19610:p.Val102= | ||||
cDNA_position | 310 | ||||
CDS_position | 306 | ||||
Protein_position | 102 | ||||
Exon_number | 3/7 | ||||
Codon_change | gtG/gtC | ||||
Amino_acid_change | V | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |