WormBase Tree Display for Variation: WBVar00558330
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WBVar00558330 | Name | Public_name | WBVar00558330 | ||
---|---|---|---|---|---|
Other_name | haw138465 | ||||
cewivar00190548 | |||||
CE19610:p.Ser248= | |||||
W05G11.6.1:c.744A>T | |||||
HGVSg | CHROMOSOME_III:g.64906T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F54C4 | |
Flanking_sequences | GCGAAGCACTTCTTTCCGAGAATCGAGTTACCTCCGTAGCCCGAGCCGAA | GACCAGATCTCGCGCTCCTTTGGACGATGGGCGATCATTACTTTCTCTGG | |||
Mapping_target | F54C4 | ||||
Type_of_mutation | Substitution | t | a | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01387475 | |||
Status | Live | ||||
Affects | Gene | WBGene00021043 | |||
Transcript | W05G11.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | W05G11.6.1:c.744A>T | ||||
HGVSp | CE19610:p.Ser248= | ||||
cDNA_position | 748 | ||||
CDS_position | 744 | ||||
Protein_position | 248 | ||||
Exon_number | 4/7 | ||||
Codon_change | tcA/tcT | ||||
Amino_acid_change | S | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |