WormBase Tree Display for Variation: WBVar00542584
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WBVar00542584 | Name | Public_name | WBVar00542584 | ||
---|---|---|---|---|---|
Other_name | haw122719 | ||||
cewivar00003672 | |||||
CE20336:p.Ser25= | |||||
Y63D3A.5.2:c.75A>G | |||||
Y63D3A.5.1:c.75A>G | |||||
HGVSg | CHROMOSOME_I:g.14102121A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y63D3A | |
Flanking_sequences | ACGAGCACAATTCTGAAGGCTCGTCACGCCGACGTCGTCCGCAAGACGTC | CTTCACCACGCCAACGACTTGACACTCATCGATCTCGTGCTCAATGTGCA | |||
Mapping_target | Y63D3A | ||||
Type_of_mutation | Substitution | a | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01355561 | |||
Status | Live | ||||
Affects | Gene | WBGene00006565 | |||
Transcript | Y63D3A.5.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y63D3A.5.2:c.75A>G | ||||
HGVSp | CE20336:p.Ser25= | ||||
cDNA_position | 75 | ||||
CDS_position | 75 | ||||
Protein_position | 25 | ||||
Exon_number | 1/4 | ||||
Codon_change | tcA/tcG | ||||
Amino_acid_change | S | ||||
Y63D3A.5.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y63D3A.5.1:c.75A>G | ||||
HGVSp | CE20336:p.Ser25= | ||||
cDNA_position | 119 | ||||
CDS_position | 75 | ||||
Protein_position | 25 | ||||
Exon_number | 2/5 | ||||
Codon_change | tcA/tcG | ||||
Amino_acid_change | S | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Yanai |