WormBase Tree Display for Variation: WBVar00540295

WBVar00540295 Name: Public_name: WBVar00540295
    Other_name: haw120430
      cewivar00171493
      M01G12.12.2:c.4509A>G
      CE23872:p.Thr1503=
      M01G12.12.1:c.4509A>G
    HGVSg: CHROMOSOME_I:g.12098992T>C
  Sequence_details: SMap: S_parent: Sequence: Y47H10A
    Flanking_sequences: TTGTTTTTGTCTTGCCGACGCAAGTTCAATTGAGAGACTTTTGATTTTTC GTTAGTTTTTTGATCAGCATATCCATATTTGCTTTTTCTGAAAAAAAAAT
    Mapping_target: Y47H10A
    Type_of_mutation: Substitution: t c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Person: WBPerson4037
    Analysis: WGS_Yanai
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01350886
    Status: Live
  Affects: Gene: WBGene00004509
    Transcript: M01G12.12.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: M01G12.12.1:c.4509A>G
        HGVSp: CE23872:p.Thr1503=
        cDNA_position: 4568
        CDS_position: 4509
        Protein_position: 1503
        Exon_number: 21/23
        Codon_change: acA/acG
        Amino_acid_change: T
      M01G12.12.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: M01G12.12.2:c.4509A>G
        HGVSp: CE23872:p.Thr1503=
        cDNA_position: 4528
        CDS_position: 4509
        Protein_position: 1503
        Exon_number: 20/22
        Codon_change: acA/acG
        Amino_acid_change: T
  Reference: WBPaper00038208
    WBPaper00037807
  Method: WGS_Yanai