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WormBase Tree Display for Variation: WBVar00535670

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Name Class

WBVar00535670NamePublic_nameWBVar00535670
Other_namehaw115805
cewivar00390248
Y54E10BR.7.1:c.1808-1314A>T
HGVSgCHROMOSOME_I:g.3036760T>A
Sequence_detailsSMapS_parentSequenceY54E10BR
Flanking_sequencesGTGAACTTTTTTTAAAAAGAAAATTTCAATAGTACTGAAATTTAAAAAAATTTTTTTCGAAAAACTGTATAGAATTTCGTTTTTTTTTTGACGTTTTTGC
Mapping_targetY54E10BR
Type_of_mutationSubstitutionta
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Yanai
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
PersonWBPerson4037
AnalysisWGS_Yanai
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01341617
StatusLive
AffectsGeneWBGene00003387
TranscriptY54E10BR.7.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10BR.7.1:c.1808-1314A>T
Intron_number11/12
ReferenceWBPaper00038208
WBPaper00037807
MethodWGS_Yanai