WormBase Tree Display for Variation: WBVar00322615

WBVar00322615 Evidence: Paper_evidence: WBPaper00037659
  Name: Public_name: snx5043
    Other_name: IS659_3248
      CE26197:p.Ala68Ser
      Y58A7A.7:n.13C>A
      Y58A7A.4.1:c.202G>T
    HGVSg: CHROMOSOME_V:g.5084806C>A
  Sequence_details: SMap: S_parent: Sequence: Y58A7A
    Flanking_sequences: CTTGCCAACGATTTTTCTTGTTGACAGAGTACACTACATTGAGCTTCAAATTATCATTTGTAGATGCATCAATTCGGTTGATGGCTTTCTGAAAAATCGAAATAAACAATACATATTAGCATTGTTGAAAGCTTACCTTGCTCAACGGCTCTGCTGCCCTAATATTTTTCTCGATGAAGGTCCTATCCTTCACTG ATTGTGAAGGCGTTCCTTTCCACCATGGTGATGTTTTCCCAGCCATCTGCGCTCTCCACGTGGCTTTTCAAACAAATTATAATAATGCAGTTCTTGC
    Mapping_target: Y58A7A
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022165
    Laboratory: IS
    Analysis: WGS_Jarriault
    Status: Live
  Affects: Gene: WBGene00021978
      WBGene00195625
    Transcript: Y58A7A.7 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y58A7A.7:n.13C>A
        cDNA_position: 13
        Exon_number: 1/1
      Y58A7A.4.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: Y58A7A.4.1:c.202G>T
        HGVSp: CE26197:p.Ala68Ser
        cDNA_position: 202
        CDS_position: 202
        Protein_position: 68
        Exon_number: 1/7
        Codon_change: Gca/Tca
        Amino_acid_change: A/S
  Genetics: Map: V
  Reference: WBPaper00037659
  Method: WGS_Jarriault