WormBase Tree Display for Variation: WBVar00318907
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| WBVar00318907 | Evidence | Paper_evidence | WBPaper00037659 | ||
|---|---|---|---|---|---|
| Name | Public_name | snx1335 | |||
| Other_name | IS656_3478 | ||||
| Y58A7A.7:n.2A>G | |||||
| CE26197:p.Asp71= | |||||
| Y58A7A.4.1:c.213T>C | |||||
| HGVSg | CHROMOSOME_V:g.5084795A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y58A7A | |
| Flanking_sequences | CTTGCCAACGATTTTTCTTGTTGACAGAGTACACTACATTGAGCTTCAAATTATCATTTGTAGATGCATCAATTCGGTTGATGGCTTTCTGAAAAATCGAAATAAACAATACATATTAGCATTGTTGAAAGCTTACCTTGCTCAACGGCTCTGCTGCCCTAATATTTTTCTCGATGAAGGTCCT | TCCTTCACTGCATTGTGAAGGCGTTCCTTTCCACCATGGTGATGTTTTCCCAGCCATCTGCGCTCTCCACGTGGCTTTTCAAACAAATTATAATAATGCAGTTCTTGC | |||
| Mapping_target | Y58A7A | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00022163 | ||||
| Laboratory | IS | ||||
| Analysis | WGS_Jarriault | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00021978 | |||
| WBGene00195625 | |||||
| Transcript | Y58A7A.7 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y58A7A.7:n.2A>G | ||||
| cDNA_position | 2 | ||||
| Exon_number | 1/1 | ||||
| Y58A7A.4.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y58A7A.4.1:c.213T>C | ||||
| HGVSp | CE26197:p.Asp71= | ||||
| cDNA_position | 213 | ||||
| CDS_position | 213 | ||||
| Protein_position | 71 | ||||
| Exon_number | 1/7 | ||||
| Codon_change | gaT/gaC | ||||
| Amino_acid_change | D | ||||
| Genetics | Map | V | |||
| Reference | WBPaper00037659 | ||||
| Method | WGS_Jarriault |
