WormBase Tree Display for Variation: WBVar00318578
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| WBVar00318578 | Evidence | Paper_evidence | WBPaper00037659 | ||
|---|---|---|---|---|---|
| Name | Public_name | snx1006 | |||
| Other_name | IS656_2514 | ||||
| Y43F4B.5b.1:c.969-220A>T | |||||
| Y43F4B.5a.1:c.1133-220A>T | |||||
| HGVSg | CHROMOSOME_III:g.13301757A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y43F4B | |
| Flanking_sequences | TTATCCAAGTTTTGTAAATTTTGATGAAAAACTACATAAAGAAACCTACA | TTTTCTTTTAAAACTTTTTTTAAAAATCGAGAATCGAAAGAAAAACTTTC | |||
| Mapping_target | Y43F4B | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00022163 | ||||
| Laboratory | IS | ||||
| Analysis | WGS_Jarriault | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00012803 | |||
| Transcript | Y43F4B.5a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F4B.5a.1:c.1133-220A>T | ||||
| Intron_number | 6/7 | ||||
| Y43F4B.5b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y43F4B.5b.1:c.969-220A>T | ||||
| Intron_number | 4/5 | ||||
| Genetics | Map | III | |||
| Reference | WBPaper00037659 | ||||
| Method | WGS_Jarriault |
