WormBase Tree Display for Variation: WBVar00309777
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| WBVar00309777 | Evidence | Paper_evidence | WBPaper00036201 | ||
|---|---|---|---|---|---|
| Name | Public_name | otn12956 | |||
| Other_name | OH8547_64392 | ||||
| F45E10.1g.1:c.2054+580C>A | |||||
| F45E10.1c.1:c.2054+580C>A | |||||
| F45E10.3:n.60G>T | |||||
| F45E10.1h.1:c.2054+580C>A | |||||
| F45E10.1a.1:c.2054+580C>A | |||||
| F45E10.1d.1:c.1652+580C>A | |||||
| F45E10.1f.1:c.1130+580C>A | |||||
| F45E10.1b.1:c.2054+580C>A | |||||
| F45E10.1e.1:c.794+580C>A | |||||
| HGVSg | CHROMOSOME_II:g.11062831G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F45E10 | |
| Flanking_sequences | CATAGAAGGTCCGCGCGGGAAAATGTGTTCCTTTTCTGAGACCACCCTTT | CTTGCCAATTACTCAAGATGGCGAAGGCAGCTGACCACCACCGACGACGA | |||
| Mapping_target | F45E10 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00029556 | ||||
| Laboratory | OTN | ||||
| Analysis | WGS_Hobert | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00202086 | |||
| WBGene00006788 | |||||
| Transcript | F45E10.1b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1b.1:c.2054+580C>A | ||||
| Intron_number | 15/22 | ||||
| F45E10.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1a.1:c.2054+580C>A | ||||
| Intron_number | 16/23 | ||||
| F45E10.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1f.1:c.1130+580C>A | ||||
| Intron_number | 8/15 | ||||
| F45E10.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1c.1:c.2054+580C>A | ||||
| Intron_number | 15/23 | ||||
| F45E10.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1e.1:c.794+580C>A | ||||
| Intron_number | 7/14 | ||||
| F45E10.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1d.1:c.1652+580C>A | ||||
| Intron_number | 13/20 | ||||
| F45E10.3 | VEP_consequence | non_coding_transcript_exon_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.3:n.60G>T | ||||
| cDNA_position | 60 | ||||
| Exon_number | 1/1 | ||||
| F45E10.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1g.1:c.2054+580C>A | ||||
| Intron_number | 15/21 | ||||
| F45E10.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1h.1:c.2054+580C>A | ||||
| Intron_number | 15/21 | ||||
| Genetics | Map | II | |||
| Reference | WBPaper00036201 | ||||
| Method | WGS_Hobert |
