WormBase Tree Display for Variation: WBVar00302573

WBVar00302573 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn5752
    Other_name: OH6087_2843
      Y48G1BM.6a.1:c.540+19T>A
      Y48G1BM.10.1:c.-1029T>A
    HGVSg: CHROMOSOME_I:g.233764A>T
  Sequence_details: SMap: S_parent: Sequence: Y48G1BM
    Flanking_sequences: ACGTTTTGTGAGAAGTCGGGCTGAAAATTTTCAAAATTTGAAACTTTTCG GAAAAATAAAAATCTCACCACAGCATTTCGAGATTTTGTCGATTGTGGAA
    Mapping_target: Y48G1BM
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029489
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00021671
      WBGene00306121
    Transcript: Y48G1BM.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G1BM.6a.1:c.540+19T>A
        Intron_number: 4/7
      Y48G1BM.10.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G1BM.10.1:c.-1029T>A
        cDNA_position: 664
        Exon_number: 1/4
  Genetics: Map: I
  Reference: WBPaper00036201
  Method: WGS_Hobert