WormBase Tree Display for Variation: WBVar00301893
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WBVar00301893 | Evidence | Paper_evidence | WBPaper00036201 | ||
---|---|---|---|---|---|
Name | Public_name | otn5072 | |||
Other_name | OH6071_70474 | ||||
B0285.1c.2:c.225T>G | |||||
B0285.1c.1:c.225T>G | |||||
B0285.1a.2:c.225T>G | |||||
B0285.1a.1:c.225T>G | |||||
CE44020:p.Gly75= | |||||
CE31401:p.Gly75= | |||||
CE44061:p.Gly75= | |||||
B0285.1b.2:c.225T>G | |||||
B0285.1b.1:c.225T>G | |||||
HGVSg | CHROMOSOME_III:g.4334156T>G | ||||
Sequence_details | SMap | S_parent | Sequence | B0285 | |
Flanking_sequences | AAAAGGTGAGCTAGTTTCAGGAATTGGTCCCGAGGCGGTGGCGGTGGTGG | CGCGACCGTGGACGAAACGATTTCAGCTATCGAAAGAAAGGCAAAGACTA | |||
Mapping_target | B0285 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00029486 | ||||
Laboratory | OTN | ||||
Analysis | WGS_Hobert | ||||
Status | Live | ||||
Affects | Gene | WBGene00007135 | |||
Transcript | B0285.1c.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | B0285.1c.2:c.225T>G | ||||
HGVSp | CE44020:p.Gly75= | ||||
cDNA_position | 234 | ||||
CDS_position | 225 | ||||
Protein_position | 75 | ||||
Exon_number | 3/15 | ||||
Codon_change | ggT/ggG | ||||
Amino_acid_change | G | ||||
B0285.1b.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | B0285.1b.2:c.225T>G | ||||
HGVSp | CE44061:p.Gly75= | ||||
cDNA_position | 229 | ||||
CDS_position | 225 | ||||
Protein_position | 75 | ||||
Exon_number | 3/15 | ||||
Codon_change | ggT/ggG | ||||
Amino_acid_change | G | ||||
B0285.1c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | B0285.1c.1:c.225T>G | ||||
HGVSp | CE44020:p.Gly75= | ||||
cDNA_position | 385 | ||||
CDS_position | 225 | ||||
Protein_position | 75 | ||||
Exon_number | 5/17 | ||||
Codon_change | ggT/ggG | ||||
Amino_acid_change | G | ||||
B0285.1a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | B0285.1a.2:c.225T>G | ||||
HGVSp | CE31401:p.Gly75= | ||||
cDNA_position | 233 | ||||
CDS_position | 225 | ||||
Protein_position | 75 | ||||
Exon_number | 3/15 | ||||
Codon_change | ggT/ggG | ||||
Amino_acid_change | G | ||||
B0285.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | B0285.1b.1:c.225T>G | ||||
HGVSp | CE44061:p.Gly75= | ||||
cDNA_position | 388 | ||||
CDS_position | 225 | ||||
Protein_position | 75 | ||||
Exon_number | 5/17 | ||||
Codon_change | ggT/ggG | ||||
Amino_acid_change | G | ||||
B0285.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | B0285.1a.1:c.225T>G | ||||
HGVSp | CE31401:p.Gly75= | ||||
cDNA_position | 361 | ||||
CDS_position | 225 | ||||
Protein_position | 75 | ||||
Exon_number | 5/17 | ||||
Codon_change | ggT/ggG | ||||
Amino_acid_change | G | ||||
Genetics | Map | III | |||
Reference | WBPaper00036201 | ||||
Method | WGS_Hobert |