WormBase Tree Display for Variation: WBVar00301891
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| WBVar00301891 | Evidence | Paper_evidence | WBPaper00036201 | ||
|---|---|---|---|---|---|
| Name | Public_name | otn5070 | |||
| Other_name | OH6071_70472 | ||||
| B0285.1b.1:c.219T>G | |||||
| CE31401:p.Gly73= | |||||
| CE44020:p.Gly73= | |||||
| CE44061:p.Gly73= | |||||
| B0285.1a.2:c.219T>G | |||||
| B0285.1c.2:c.219T>G | |||||
| B0285.1c.1:c.219T>G | |||||
| B0285.1a.1:c.219T>G | |||||
| B0285.1b.2:c.219T>G | |||||
| HGVSg | CHROMOSOME_III:g.4334150T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | B0285 | |
| Flanking_sequences | AGTTGTAAAAGGTGAGCTAGTTTCAGGAATTGGTCCCGAGGCGGTGGCGG | GGTGGTCGCGACCGTGGACGAAACGATTTCAGCTATCGAAAGAAAGGCAA | |||
| Mapping_target | B0285 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00029486 | ||||
| Laboratory | OTN | ||||
| Analysis | WGS_Hobert | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00007135 | |||
| Transcript | B0285.1c.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | B0285.1c.2:c.219T>G | ||||
| HGVSp | CE44020:p.Gly73= | ||||
| cDNA_position | 228 | ||||
| CDS_position | 219 | ||||
| Protein_position | 73 | ||||
| Exon_number | 3/15 | ||||
| Codon_change | ggT/ggG | ||||
| Amino_acid_change | G | ||||
| B0285.1b.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | B0285.1b.2:c.219T>G | ||||
| HGVSp | CE44061:p.Gly73= | ||||
| cDNA_position | 223 | ||||
| CDS_position | 219 | ||||
| Protein_position | 73 | ||||
| Exon_number | 3/15 | ||||
| Codon_change | ggT/ggG | ||||
| Amino_acid_change | G | ||||
| B0285.1c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | B0285.1c.1:c.219T>G | ||||
| HGVSp | CE44020:p.Gly73= | ||||
| cDNA_position | 379 | ||||
| CDS_position | 219 | ||||
| Protein_position | 73 | ||||
| Exon_number | 5/17 | ||||
| Codon_change | ggT/ggG | ||||
| Amino_acid_change | G | ||||
| B0285.1a.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | B0285.1a.2:c.219T>G | ||||
| HGVSp | CE31401:p.Gly73= | ||||
| cDNA_position | 227 | ||||
| CDS_position | 219 | ||||
| Protein_position | 73 | ||||
| Exon_number | 3/15 | ||||
| Codon_change | ggT/ggG | ||||
| Amino_acid_change | G | ||||
| B0285.1b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | B0285.1b.1:c.219T>G | ||||
| HGVSp | CE44061:p.Gly73= | ||||
| cDNA_position | 382 | ||||
| CDS_position | 219 | ||||
| Protein_position | 73 | ||||
| Exon_number | 5/17 | ||||
| Codon_change | ggT/ggG | ||||
| Amino_acid_change | G | ||||
| B0285.1a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | B0285.1a.1:c.219T>G | ||||
| HGVSp | CE31401:p.Gly73= | ||||
| cDNA_position | 355 | ||||
| CDS_position | 219 | ||||
| Protein_position | 73 | ||||
| Exon_number | 5/17 | ||||
| Codon_change | ggT/ggG | ||||
| Amino_acid_change | G | ||||
| Genetics | Map | III | |||
| Reference | WBPaper00036201 | ||||
| Method | WGS_Hobert |
