WormBase Tree Display for Variation: WBVar00296810

WBVar00296810 Evidence: Paper_evidence: WBPaper00037648
  Name: Public_name: hd121
    Other_name: F15B9.7c.1:c.3509G>A
      F15B9.7a.1:c.6551G>A
      CE50392:p.Trp1170Ter
      CE50507:p.Trp1825Ter
      CE42459:p.Trp2184Ter
      F15B9.7b.1:c.5474G>A
    HGVSg: CHROMOSOME_V:g.13031506G>A
  Sequence_details: SMap: S_parent: Sequence: W07G4
    Flanking_sequences: gtgttcgttttgatgagaaatcaggaacat gacggcccgaggagcagctttgattggtct
    Mapping_target: W07G4
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00037648
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00040028
    Laboratory: VH
    Status: Live
  Affects: Gene: WBGene00001475
    Transcript: F15B9.7b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F15B9.7b.1:c.5474G>A
        HGVSp: CE50507:p.Trp1825Ter
        cDNA_position: 5474
        CDS_position: 5474
        Protein_position: 1825
        Exon_number: 18/21
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      F15B9.7a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F15B9.7a.1:c.6551G>A
        HGVSp: CE42459:p.Trp2184Ter
        cDNA_position: 6578
        CDS_position: 6551
        Protein_position: 2184
        Exon_number: 23/27
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      F15B9.7c.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F15B9.7c.1:c.3509G>A
        HGVSp: CE50392:p.Trp1170Ter
        cDNA_position: 3509
        CDS_position: 3509
        Protein_position: 1170
        Exon_number: 11/14
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
  Genetics: Interpolated_map_position: V 4.81867
  Reference: WBPaper00037648
  Method: Substitution_allele