WormBase Tree Display for Variation: WBVar00296805
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WBVar00296805 | Evidence | Paper_evidence | WBPaper00037647 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | ju445 | |||||||
Other_name | K09C8.5.1:c.546-1G>A | ||||||||
HGVSg | CHROMOSOME_X:g.10978306C>T | ||||||||
Sequence_details | SMap | S_parent | Sequence | F59F3 | |||||
Flanking_sequences | aacaatattgactgaataattttaaattaa | aatggttaatgtaaaacaatttgctgattc | |||||||
Mapping_target | F59F3 | ||||||||
Type_of_mutation | Substitution | g | a | ||||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Laboratory | CZ | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00004257 | |||||||
Transcript | K09C8.5.1 | VEP_consequence | splice_acceptor_variant | ||||||
VEP_impact | HIGH | ||||||||
HGVSc | K09C8.5.1:c.546-1G>A | ||||||||
Intron_number | 5/22 | ||||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00037647 | |||||
Genetics | Interpolated_map_position | X | 2.78914 | ||||||
Description | Phenotype | WBPhenotype:0000050 | Paper_evidence | WBPaper00037647 | |||||
Curator_confirmed | WBPerson10095 | ||||||||
Penetrance | Complete | 100% | Paper_evidence | WBPaper00037647 | |||||
Curator_confirmed | WBPerson10095 | ||||||||
Recessive | Paper_evidence | WBPaper00037647 | |||||||
Curator_confirmed | WBPerson10095 | ||||||||
Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00037647 | ||||||
Curator_confirmed | WBPerson10095 | ||||||||
WBPhenotype:0000057 | Paper_evidence | WBPaper00037647 | |||||||
Curator_confirmed | WBPerson10095 | ||||||||
Penetrance | Complete | 100% | Paper_evidence | WBPaper00037647 | |||||
Curator_confirmed | WBPerson10095 | ||||||||
Recessive | Paper_evidence | WBPaper00037647 | |||||||
Curator_confirmed | WBPerson10095 | ||||||||
Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00037647 | ||||||
Curator_confirmed | WBPerson10095 | ||||||||
WBPhenotype:0002588 | Paper_evidence | WBPaper00037647 | |||||||
Curator_confirmed | WBPerson10095 | ||||||||
Penetrance | Complete | 100% | Paper_evidence | WBPaper00037647 | |||||
Curator_confirmed | WBPerson10095 | ||||||||
Recessive | Paper_evidence | WBPaper00037647 | |||||||
Curator_confirmed | WBPerson10095 | ||||||||
Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00037647 | ||||||
Curator_confirmed | WBPerson10095 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0005733 | PATO:0000460 | Paper_evidence | WBPaper00037647 | ||||
Curator_confirmed | WBPerson10095 | ||||||||
WBbt:0005813 | PATO:0000460 | Paper_evidence | WBPaper00037647 | ||||||
Curator_confirmed | WBPerson10095 | ||||||||
Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00037647 | |||||
Curator_confirmed | WBPerson10095 | ||||||||
GO_term | GO:0009790 | PATO:0000460 | Paper_evidence | WBPaper00037647 | |||||
Curator_confirmed | WBPerson10095 | ||||||||
GO:0005604 | PATO:0000460 | Paper_evidence | WBPaper00037647 | ||||||
Curator_confirmed | WBPerson10095 | ||||||||
Reference | WBPaper00037647 | ||||||||
Method | Substitution_allele |