WormBase Tree Display for Variation: WBVar00296602
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WBVar00296602 | Evidence | Paper_evidence | WBPaper00036232 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | ku432 | |||||
HGVSg | CHROMOSOME_IV:g.9707077_9707374del | ||||||
Sequence_details | SMap | S_parent | Sequence | K01H12 | |||
Flanking_sequences | aaattgatttgcgaaaaaaaattatcgccc | gtaagtggctcaactcgggtattttaattc | |||||
Mapping_target | K01H12 | ||||||
Type_of_mutation | Deletion | ||||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00026526 | ||||||
Laboratory | MH | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00010484 | |||||
Transcript | K01H12.1a.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | ||||||
Intron_number | 2/3 | ||||||
Exon_number | 1-2/4 | ||||||
Interactor | WBInteraction000500299 | ||||||
WBInteraction000500300 | |||||||
WBInteraction000500301 | |||||||
Genetics | Interpolated_map_position | IV | 4.37892 | ||||
Description | Phenotype_not_observed | WBPhenotype:0000700 | Paper_evidence | WBPaper00036232 | |||
Curator_confirmed | WBPerson712 | ||||||
Variation_effect | Loss_of_function_undetermined_extent | Paper_evidence | WBPaper00036232 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00036232 | ||||||
Method | Deletion_allele |