WormBase Tree Display for Variation: WBVar00278346

WBVar00278346 Name: Public_name: gk1083
    HGVSg: CHROMOSOME_IV:g.2146250_2146824del
  Sequence_details: SMap: S_parent: Sequence: C54E4
    Flanking_sequences: tgaataccgttaattttttttttttaatta ttcgctgaaaaatataatttctttctggtg
    Mapping_target: C54E4
    Type_of_mutation: Deletion
    PCR_product: GK1083_external
      GK1083_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037144
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00016920
      WBGene00016918
    Transcript: C54E4.5.1 VEP_consequence: coding_sequence_variant,3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 728-?
        CDS_position: 727-?
        Protein_position: 243-?
        Exon_number: 6-7/7
      C54E4.2a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 8/9
        Exon_number: 9-10/10
      C54E4.2c.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 4/4
        Exon_number: 5/5
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele