WormBase Tree Display for Variation: WBVar00277462
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WBVar00277462 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2555 | |||
Other_name | CE42370:p.Glu1032= | ||||
F15D4.1.1:c.3096G>A | |||||
HGVSg | CHROMOSOME_II:g.13209995G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W09E7 | |
Flanking_sequences | GATCTTTCCACTGCTCGCTGATCAATGTGA | ACTGTCAGAGATGCTGCTGGAGAAGCATTC | |||
Mapping_target | W09E7 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037340 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000274 | |||
Transcript | F15D4.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F15D4.1.1:c.3096G>A | ||||
HGVSp | CE42370:p.Glu1032= | ||||
cDNA_position | 3102 | ||||
CDS_position | 3096 | ||||
Protein_position | 1032 | ||||
Exon_number | 12/17 | ||||
Codon_change | gaG/gaA | ||||
Amino_acid_change | E | ||||
Isolation | Mutagen | ENU | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |