WormBase Tree Display for Gene: WBGene00000274

WBGene00000274 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 1
    Name: CGC_name: btf-1
      Sequence_name: F15D4.1
      Molecular_name: F15D4.1
        F15D4.1.1
        CE42370
      Other_name: CELE_F15D4.1 Accession_evidence: NDB BX284602
      Public_name: btf-1
    DB_info: Database: AceView gene 2N505
        WormQTL gene WBGene00000274
        WormFlux gene WBGene00000274
        NDB locus_tag CELE_F15D4.1
        Panther gene CAEEL|WormBase=WBGene00000274|UniProtKB=G5EF07
          family PTHR10799
        NCBI gene 174965
        RefSeq protein NM_064401.8
        TREEFAM TREEFAM_ID TF352672
        TrEMBL UniProtAcc G5EF07
        UniProt_GCRP UniProtAcc G5EF07
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: btf
    Allele (742)
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP2601
    Ortholog (36)
    Paralog (19)
    Structured_description: Concise_description: btf-1 encodes a member of the TBP-associated family (TAF), with weak similarity to human TBP-associated factor 172. Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable ATP-dependent activity, acting on DNA and DNA binding activity. Predicted to be involved in chromatin remodeling. Predicted to be located in nucleus. Is an ortholog of human BTAF1 (B-TFIID TATA-box binding protein associated factor 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F15D4.1
    Corresponding_CDS_history: F15D4.1:wp188
    Corresponding_transcript: F15D4.1.1
    Other_sequence (45)
    Associated_feature: WBsf644798
      WBsf658348
      WBsf658349
      WBsf990356
      WBsf990357
      WBsf990358
      WBsf1013585
      WBsf1013586
      WBsf222344
      WBsf222345
  Experimental_info: RNAi_result: WBRNAi00044715 Inferred_automatically: RNAi_primary
      WBRNAi00013365 Inferred_automatically: RNAi_primary
      WBRNAi00081562 Inferred_automatically: RNAi_primary
      WBRNAi00044714 Inferred_automatically: RNAi_primary
      WBRNAi00075545 Inferred_automatically: RNAi_primary
      WBRNAi00001042 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021979
      Expr1030178
      Expr1148688
      Expr2009679
      Expr2027918
    Microarray_results (18)
    Expression_cluster (93)
    Interaction (129)
  Map_info: Map: II Position: 15.9344 Error: 0.076486
    Positive: Positive_clone: F15D4 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00065308
  Remark: Sequence connection from [Blackwell TK]. 02/06/12 krb.
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene