WormBase Tree Display for Variation: WBVar00276570
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WBVar00276570 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk1533 | |||
Other_name | F44C4.3.1:c.-6A>C | ||||
HGVSg | CHROMOSOME_V:g.6614706A>C | ||||
Sequence_details | SMap | S_parent | Sequence | F44C4 | |
Flanking_sequences | CATTTGCTCTATCTTGCTATTTGCTCTTTT | CAAAAATGGTAAGTGGTTGTTTTAGCGTGA | |||
Mapping_target | F44C4 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036969 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000784 | |||
Transcript | F44C4.3.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F44C4.3.1:c.-6A>C | ||||
cDNA_position | 33 | ||||
Exon_number | 1/4 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |