WormBase Tree Display for Variation: WBVar00276528

WBVar00276528 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: ok5884
    Other_name: F39C12.2b.1:c.1994-24G>A
      F39C12.2c.1:c.1993+73G>A
      F39C12.2d.1:c.1934-206G>A
      F39C12.2e.1:c.1994-24G>A
      F39C12.2a.1:c.1993+73G>A
    HGVSg: CHROMOSOME_X:g.4855079C>T
  Sequence_details: SMap: S_parent: Sequence: F39C12
    Flanking_sequences: TGATCGCCTGTACACAAAGAGTTAGAAAAT TGTGAAAGTTATAAAAAGCTTTGAAGCCAC
    Mapping_target: F39C12
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033306
    Laboratory: RB
    Person: WBPerson46
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00000072
    Transcript: F39C12.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2b.1:c.1994-24G>A
        Intron_number: 16/19
      F39C12.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2a.1:c.1993+73G>A
        Intron_number: 15/16
      F39C12.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2c.1:c.1993+73G>A
        Intron_number: 16/18
      F39C12.2e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2e.1:c.1994-24G>A
        Intron_number: 15/15
      F39C12.2d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2d.1:c.1934-206G>A
        Intron_number: 14/16
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele