WormBase Tree Display for Variation: WBVar00276456

WBVar00276456 Evidence: Paper_evidence: WBPaper00036200
  Name: Public_name: gk2123
    Other_name: CE53407:p.Ser533Phe
      F31A3.5.2:c.1598C>T
      F31A3.5.1:c.1598C>T
    HGVSg: CHROMOSOME_X:g.17556398G>A
  Sequence_details: SMap: S_parent: Sequence: F31A3
    Flanking_sequences: CAAGAGTCCATGCTCCGGCTCATTGCATCA ACGCTGTGGCGTGAGGGATGGGGACCCCAG
    Mapping_target: F31A3
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036970
    Laboratory: VC
    Person: WBPerson427
    Analysis: Million_Mutation_Pilot_Project
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00017939
    Transcript: F31A3.5.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F31A3.5.1:c.1598C>T
        HGVSp: CE53407:p.Ser533Phe
        cDNA_position: 1712
        CDS_position: 1598
        Protein_position: 533
        Exon_number: 12/14
        Codon_change: tCt/tTt
        Amino_acid_change: S/F
      F31A3.5.2 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: F31A3.5.2:c.1598C>T
        HGVSp: CE53407:p.Ser533Phe
        cDNA_position: 1655
        CDS_position: 1598
        Protein_position: 533
        Exon_number: 11/13
        Codon_change: tCt/tTt
        Amino_acid_change: S/F
  Isolation: Mutagen: EMS
  Reference: WBPaper00036200
  Remark: Allele identified through whole-genome sequencing by the Gene Knockout Consortium Paper_evidence: WBPaper00036200
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele