WormBase Tree Display for Gene: WBGene00017939
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| WBGene00017939 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F31A3.5 | |||||||
| Molecular_name | F31A3.5 | ||||||||
| F31A3.5.1 | |||||||||
| CE53407 | |||||||||
| F31A3.5.2 | |||||||||
| Other_name | CELE_F31A3.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F31A3.5 | ||||||||
| DB_info | Database | AceView | gene | XS170 | |||||
| WormQTL | gene | WBGene00017939 | |||||||
| WormFlux | gene | WBGene00017939 | |||||||
| NDB | locus_tag | CELE_F31A3.5 | |||||||
| NCBI | gene | 181785 | |||||||
| RefSeq | protein | NM_001375210.2 | |||||||
| TREEFAM | TREEFAM_ID | TF339969 | |||||||
| TrEMBL | UniProtAcc | P90857 | |||||||
| UniProt_GCRP | UniProtAcc | P90857 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (112) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapaa; RIS; anterior ganglion (post); germ line; and mechanosensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; eat-2; and npr-1 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including Cry5B; silicon dioxide nanoparticle; and paraquat based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F31A3.5 | |||||||
| Corresponding_CDS_history | F31A3.5:wp108 | ||||||||
| F31A3.5:wp271 | |||||||||
| Corresponding_transcript | F31A3.5.1 | ||||||||
| F31A3.5.2 | |||||||||
| Other_sequence | JI165547.1 | ||||||||
| Tcir_isotig06435 | |||||||||
| CRC07287_1 | |||||||||
| CR05744 | |||||||||
| Associated_feature | WBsf669995 | ||||||||
| WBsf1008959 | |||||||||
| WBsf1008960 | |||||||||
| WBsf1008961 | |||||||||
| WBsf1008962 | |||||||||
| WBsf1008963 | |||||||||
| WBsf1025063 | |||||||||
| WBsf1025064 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031605 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001473 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045981 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014130 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094866 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026370 | ||||||||
| Expr1037717 | |||||||||
| Expr1149880 | |||||||||
| Expr2003166 | |||||||||
| Expr2021379 | |||||||||
| Drives_construct | WBCnstr00026899 | ||||||||
| Construct_product | WBCnstr00026899 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction | WBInteraction000404932 | ||||||||
| WBInteraction000521065 | |||||||||
| WBInteraction000548211 | |||||||||
| WBInteraction000584347 | |||||||||
| Map_info | Positive | Positive_clone | F31A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.3592 | |||||||
| Method | Gene |
