WormBase Tree Display for Variation: WBVar00275067

WBVar00275067 Evidence: Paper_evidence: WBPaper00004713
  Name: Public_name: vs23
    HGVSg: CHROMOSOME_I:g.7320159_7321429del
  Sequence_details: SMap: S_parent: Sequence: F52A8
    Flanking_sequences: tcctatttttgagcatgttcaacagaataa atgggagctcttggtgtaaaacagcgtcga
    Mapping_target: F52A8
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: LX
    Status: Live
  Affects: Gene: WBGene00001680
    Transcript: F52A8.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-332
        CDS_position: ?-195
        Protein_position: ?-65
        Intron_number: 2-3/9
        Exon_number: 1-4/10
    Interactor: WBInteraction000504654
      WBInteraction000517387
  Isolation: Mutagen: TMP Paper_evidence: WBPaper00004713
  Genetics: Interpolated_map_position: I 1.91103
  Description: Phenotype: WBPhenotype:0000120 Paper_evidence: WBPaper00035489
        Curator_confirmed: WBPerson2021
        Remark: Mutations in GPB-2/G5 resulted in the reduction of both EGL-10 and EAT-16 protein levels Paper_evidence: WBPaper00035489
            Curator_confirmed: WBPerson2021
        Phenotype_assay: Treatment: Western blots Paper_evidence: WBPaper00035489
              Curator_confirmed: WBPerson2021
    Phenotype_not_observed: WBPhenotype:0000640 Paper_evidence: WBPaper00035489
        Curator_confirmed: WBPerson2021
        Remark: Mutations in GPB-2/G5 resulted in animals whose egg laying more closely resembled that of wild-type animals Paper_evidence: WBPaper00035489
            Curator_confirmed: WBPerson2021
  Reference: WBPaper00035489
  Remark: vs23 is a deletion of 1271 bp [030411 ck1]
  Method: Deletion_allele