WormBase Tree Display for Variation: WBVar00272212

WBVar00272212 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00272212
    Other_name: uCE5-1563
      cewivar00237795
      C50E3.10.1:c.119A>C
      CE08903:p.Asp40Ala
    HGVSg: CHROMOSOME_V:g.7601425T>G
  Sequence_details: SMap: S_parent: Sequence: C50E3
    Flanking_sequences: TAGATAAGAGAAAATATATCATAAAGCTTATAAATTTACCAATTTTTGCATGTCAGTCGATTTGGAGATATTGTGGCGAGCCCAAAGGCCTTGAGAGGCA CATTTCTTAGCTTGTTGTGAACAAAAACAAGTCCTTCTATCGCAGTTTCATTCCACTCGTGGGTACTGGCGAAAGAGCCAACAGTAAGACCCAAAAGGAT
    Mapping_target: C50E3
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Swan
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00016821
    Transcript: C50E3.10.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.59 tolerated
        PolyPhen: 0.009 benign
        HGVSc: C50E3.10.1:c.119A>C
        HGVSp: CE08903:p.Asp40Ala
        cDNA_position: 119
        CDS_position: 119
        Protein_position: 40
        Exon_number: 1/4
        Codon_change: gAt/gCt
        Amino_acid_change: D/A
  Reference: WBPaper00005369
  Method: SNP_Swan