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WormBase Tree Display for Variation: WBVar00267926

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Name Class

WBVar00267926EvidencePaper_evidenceWBPaper00005369
NamePublic_nameWBVar00267926
Other_nameuCE2-748
F56D12.1b.1:c.38del
CE33403:p.Lys14AsnfsTer10
F56D12.1c.1:c.38del
CE37118:p.Lys14AsnfsTer10
CE29047:p.Lys14AsnfsTer10
F56D12.1a.1:c.38del
F56D12.1a.2:c.38del
HGVSgCHROMOSOME_II:g.1309714del
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencesTTCTTTGCTTCCTTTTCGATACTCTAAAATCGGCTCATTTGTCTTCTTTTTGAGAAAATCCGCCGATGTTAGACCGCTGTACGTGCTGGCGGCGCATTTTGTGTGATTAAGGAGCGTCGAGCTGCGAATGAGAGCATTTTCTGCAAAAATGAGAATAAAATGAGCTTTTAATCGATTTAATTCGATAAAACGTGGATAAA
Mapping_targetF56D12
Type_of_mutationDeletionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
AnalysisSNP_Swan
StatusLive
AffectsGeneWBGene00000112
TranscriptF56D12.1b.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScF56D12.1b.1:c.38del
HGVSpCE33403:p.Lys14AsnfsTer10
cDNA_position40
CDS_position38
Protein_position13
Exon_number2/8
Codon_changecAa/ca
Amino_acid_changeQ/X
F56D12.1a.2VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScF56D12.1a.2:c.38del
HGVSpCE29047:p.Lys14AsnfsTer10
cDNA_position137
CDS_position38
Protein_position13
Exon_number3/10
Codon_changecAa/ca
Amino_acid_changeQ/X
F56D12.1a.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScF56D12.1a.1:c.38del
HGVSpCE29047:p.Lys14AsnfsTer10
cDNA_position41
CDS_position38
Protein_position13
Exon_number2/9
Codon_changecAa/ca
Amino_acid_changeQ/X
F56D12.1c.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScF56D12.1c.1:c.38del
HGVSpCE37118:p.Lys14AsnfsTer10
cDNA_position38
CDS_position38
Protein_position13
Exon_number1/6
Codon_changecAa/ca
Amino_acid_changeQ/X
ReferenceWBPaper00005369
MethodSNP_Swan