WormBase Tree Display for Variation: WBVar00251470

WBVar00251470 Name: Public_name: tm2616
    Other_name: F56F10.4.1:c.1028-9_1212+17delinsTTCGGTGTG
    HGVSg: CHROMOSOME_X:g.868576_868786delinsCACACCGAA
  Sequence_details: SMap: S_parent: Sequence: F56F10
    Flanking_sequences: cctactatgagaaattaccctttccaaaagttaaaaaa attcaaaattaggaaaaaaatagttcgaat
    Mapping_target: F56F10
    Source_location: 7 CHROMOSOME_X 868575 868787 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: CACACCGAA
      Deletion
    PCR_product: tm2616_external
      tm2616_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023580
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2616
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00018987
    Transcript: F56F10.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F56F10.4.1:c.1028-9_1212+17delinsTTCGGTGTG
        Intron_number: 7-8/15
        Exon_number: 8/16
    Interactor: WBInteraction000504682
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 16636/16637-CACACCGAA-16847/16848 (211 bp deletion + 9 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele