WormBase Tree Display for Variation: WBVar00251000

WBVar00251000 Name: Public_name: tm2054
    Other_name: C15H11.6.1:c.741+21_1201del
    HGVSg: CHROMOSOME_V:g.14416307_14416843del
  Sequence_details: SMap: S_parent: Sequence: C15H11
    Flanking_sequences: aaatatataattttcactggtcaatgtccg aaaaatgcaagaatcagcacgttatttgtg
    Mapping_target: C15H11
    Source_location: 7 CHROMOSOME_V 14416306 14416844 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm2054_external
      tm2054_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2054
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003835
    Transcript: C15H11.6.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C15H11.6.1:c.741+21_1201del
        cDNA_position: ?-1241
        CDS_position: ?-1201
        Protein_position: ?-401
        Intron_number: 6-7/8
        Exon_number: 7-8/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
  Remark: 31795/31796-32332/32333 (537 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele