WormBase Tree Display for Variation: WBVar00250401

WBVar00250401 Name: Public_name: tm1408
    HGVSg: CHROMOSOME_V:g.11825478_11826291del
  Sequence_details: SMap: S_parent: Sequence: D2023
    Flanking_sequences: ggctcctctccgataaatgcaatgaatcct aggtagatttttgaaaccagcgattctagt
    Mapping_target: D2023
    Source_location: 7 CHROMOSOME_V 11825477 11826292 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm1408_external
      tm1408_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 1408
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00008409
      WBGene00008408
    Transcript: D2023.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 732-?
        CDS_position: 727-?
        Protein_position: 243-?
        Intron_number: 3/4
        Exon_number: 3-5/5
      D2023.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/5
        Exon_number: 1-3/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
    Mapping_data: In_multi_point: 4799
        4835
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 34509/34510-35323/35324 (814 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele