WormBase Tree Display for Variation: WBVar00249676

WBVar00249676 Name: Public_name: tm644
    Other_name: F18F11.3h.1:c.695+39_696-205del
      F18F11.3f.1:c.695+39_696-205del
      F18F11.3c.1:c.695+39_696-205del
      F18F11.3g.1:c.695+39_696-205del
      F18F11.3b.1:c.695+39_696-205del
      F18F11.3a.1:c.695+39_696-205del
      F18F11.3e.1:c.695+39_696-205del
      F18F11.3d.1:c.695+39_696-205del
    HGVSg: CHROMOSOME_IV:g.346131_346617del
  Sequence_details: SMap: S_parent: Sequence: F18F11
    Flanking_sequences: taaacgttatttggatcataatagctacct ctggcgctactctatcaatttactgttaga
    Mapping_target: F18F11
    Source_location: 7 CHROMOSOME_IV 346130 346618 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm644_external
      tm644_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 644
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017576
    Transcript: F18F11.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3e.1:c.695+39_696-205del
        Intron_number: 7/25
      F18F11.3g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3g.1:c.695+39_696-205del
        Intron_number: 7/25
      F18F11.3f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3f.1:c.695+39_696-205del
        Intron_number: 7/24
      F18F11.3h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3h.1:c.695+39_696-205del
        Intron_number: 7/26
      F18F11.3d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3d.1:c.695+39_696-205del
        Intron_number: 7/25
      F18F11.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3a.1:c.695+39_696-205del
        Intron_number: 7/25
      F18F11.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3b.1:c.695+39_696-205del
        Intron_number: 7/23
      F18F11.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18F11.3c.1:c.695+39_696-205del
        Intron_number: 7/24
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 18739/18740-19226/19227 (487 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele