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WormBase Tree Display for Variation: WBVar00249030

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Name Class

WBVar00249030EvidencePaper_evidenceWBPaper00005799
NamePublic_namesy673
Other_nameCE54320:p.Trp57Ter
CE54329:p.Trp57Ter
CE41297:p.Trp123Ter
C30D11.1l.1:c.171G>A
C30D11.1s.1:c.255G>A
C30D11.1e.1:c.285G>A
CE41302:p.Trp85Ter
CE41300:p.Trp99Ter
C30D11.1f.1:c.255G>A
CE54330:p.Trp95Ter
C30D11.1j.1:c.576G>A
CE54339:p.Trp95Ter
C30D11.1m.1:c.171G>A
C30D11.1i.1:c.117G>A
C30D11.1q.1:c.285G>A
CE41298:p.Trp115Ter
CE54333:p.Trp85Ter
CE41301:p.Trp95Ter
C30D11.1g.1:c.255G>A
C30D11.1k.1:c.171G>A
CE41299:p.Trp157Ter
C30D11.1a.1:c.369G>A
CE54336:p.Trp95Ter
C30D11.1d.1:c.297G>A
CE48244:p.Trp192Ter
CE05338:p.Trp85Ter
C30D11.1b.1:c.345G>A
C30D11.1o.1:c.285G>A
C30D11.1c.1:c.471G>A
CE48274:p.Trp39Ter
CE54332:p.Trp57Ter
CE27805:p.Trp85Ter
C30D11.1n.1:c.171G>A
C30D11.1r.1:c.255G>A
C30D11.1h.1:c.255G>A
CE54338:p.Trp57Ter
C30D11.1p.1:c.285G>A
CE41303:p.Trp85Ter
HGVSgCHROMOSOME_III:g.4139814G>A
Sequence_detailsSMapS_parentSequenceC30D11
Flanking_sequencestttcagtccgttcaaagcagtatgggattgataattctgttacttgtaatatatacggct
Mapping_targetC30D11
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00005799
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryPS
StatusLive
AffectsGeneWBGene00006830
TranscriptC30D11.1k.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1k.1:c.171G>A
HGVSpCE54320:p.Trp57Ter
cDNA_position292
CDS_position171
Protein_position57
Exon_number4/17
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1l.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1l.1:c.171G>A
HGVSpCE54338:p.Trp57Ter
cDNA_position292
CDS_position171
Protein_position57
Exon_number4/16
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1h.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1h.1:c.255G>A
HGVSpCE41303:p.Trp85Ter
cDNA_position255
CDS_position255
Protein_position85
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1a.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1a.1:c.369G>A
HGVSpCE41297:p.Trp123Ter
cDNA_position369
CDS_position369
Protein_position123
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1j.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1j.1:c.576G>A
HGVSpCE48244:p.Trp192Ter
cDNA_position576
CDS_position576
Protein_position192
Exon_number4/16
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1q.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1q.1:c.285G>A
HGVSpCE54330:p.Trp95Ter
cDNA_position285
CDS_position285
Protein_position95
Exon_number3/14
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1c.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1c.1:c.471G>A
HGVSpCE41299:p.Trp157Ter
cDNA_position471
CDS_position471
Protein_position157
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1e.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1e.1:c.285G>A
HGVSpCE41301:p.Trp95Ter
cDNA_position285
CDS_position285
Protein_position95
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1m.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1m.1:c.171G>A
HGVSpCE54332:p.Trp57Ter
cDNA_position171
CDS_position171
Protein_position57
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1p.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1p.1:c.285G>A
HGVSpCE54336:p.Trp95Ter
cDNA_position285
CDS_position285
Protein_position95
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1f.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1f.1:c.255G>A
HGVSpCE27805:p.Trp85Ter
cDNA_position255
CDS_position255
Protein_position85
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1i.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1i.1:c.117G>A
HGVSpCE48274:p.Trp39Ter
cDNA_position117
CDS_position117
Protein_position39
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1b.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1b.1:c.345G>A
HGVSpCE41298:p.Trp115Ter
cDNA_position345
CDS_position345
Protein_position115
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1o.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1o.1:c.285G>A
HGVSpCE54339:p.Trp95Ter
cDNA_position389
CDS_position285
Protein_position95
Exon_number4/16
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1d.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1d.1:c.297G>A
HGVSpCE41300:p.Trp99Ter
cDNA_position297
CDS_position297
Protein_position99
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1s.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1s.1:c.255G>A
HGVSpCE54333:p.Trp85Ter
cDNA_position255
CDS_position255
Protein_position85
Exon_number3/14
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1g.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1g.1:c.255G>A
HGVSpCE41302:p.Trp85Ter
cDNA_position255
CDS_position255
Protein_position85
Exon_number3/14
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1r.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1r.1:c.255G>A
HGVSpCE05338:p.Trp85Ter
cDNA_position255
CDS_position255
Protein_position85
Exon_number3/15
Codon_changetgG/tgA
Amino_acid_changeW/*
C30D11.1n.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScC30D11.1n.1:c.171G>A
HGVSpCE54329:p.Trp57Ter
cDNA_position171
CDS_position171
Protein_position57
Exon_number3/14
Codon_changetgG/tgA
Amino_acid_changeW/*
GeneticsInterpolated_map_positionIII-3.78446
DescriptionPhenotypeWBPhenotype:0000005Paper_evidenceWBPaper00041908
Curator_confirmedWBPerson8467
Remark>50% of eggs laid are at early stages of development (8 cells or less)Paper_evidenceWBPaper00041908
Curator_confirmedWBPerson8467
WBPhenotype:0004008Paper_evidenceWBPaper00005799
Curator_confirmedWBPerson625
Remarkspicule protraction constitutivePaper_evidenceWBPaper00005799
Curator_confirmedWBPerson625
EQ_annotationsAnatomy_termWBbt:0005312PATO:0000460Paper_evidenceWBPaper00005799
Curator_confirmedWBPerson625
ReferenceWBPaper00041908
WBPaper00005799
MethodSubstitution_allele