WormBase Tree Display for Variation: WBVar00248788

WBVar00248788 Evidence: Paper_evidence: WBPaper00005261
  Name: Public_name: st579
    Other_name: C29F9.7.1:c.170G>A
      CE19706:p.Trp57Ter
    HGVSg: CHROMOSOME_III:g.94072C>T
  Sequence_details: SMap: S_parent: Sequence: C29F9
    Flanking_sequences: gagacgatcacgccttctcactgctccact ggccgcgaagggcggccacgtggcgattgc
    Mapping_target: C29F9
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00005261
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: RW
    Status: Live
  Affects: Gene: WBGene00003931
    Transcript: C29F9.7.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C29F9.7.1:c.170G>A
        HGVSp: CE19706:p.Trp57Ter
        cDNA_position: 176
        CDS_position: 170
        Protein_position: 57
        Exon_number: 3/10
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
  Genetics: Interpolated_map_position: III -26.9857
  Description: Phenotype (2)
    Phenotype_not_observed: WBPhenotype:0001396 Paper_evidence: WBPaper00001894
        Curator_confirmed: WBPerson2021
        Remark: Pharyngeal pumping movements were observed in mutants. Paper_evidence: WBPaper00001894
            Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000015 PATO:0000460 Paper_evidence: WBPaper00001894
                Curator_confirmed: WBPerson2021
  Reference: WBPaper00001894
  Method: Substitution_allele