WormBase Tree Display for Variation: WBVar00245826
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WBVar00245826 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00245826 | |||
Other_name | snp_R05H10[7] | ||||
R05H10.5b.1:c.11-398del | |||||
HGVSg | CHROMOSOME_II:g.14867239del | ||||
Sequence_details | SMap | S_parent | Sequence | R05H10 | |
Flanking_sequences | attttgaaaaattcagaaaaaaaaa | tctaaacaagctcgattttcagaga | |||
Mapping_target | R05H10 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00011045 | |||
Transcript | R05H10.5b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R05H10.5b.1:c.11-398del | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8956 VarD1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_R05H10.7 | |||||
[20040130 db] this Allele was previously named snp_R05H10.7 | |||||
[20090224 db] original Wicks name : R05H10:39629..40567@589 Psnp=0.8956 VarD1=A | |||||
[20090224 db] original Wicks id : eam67a08.s1@517,-,44 | |||||
Method | SNP_Wicks |