Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00244859

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00244859EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244859
Other_namesnp_F46F6[3]
F46F6.4c.2:c.56-231_56-230insA
F46F6.4d.1:c.56-231_56-230insA
F46F6.4c.1:c.56-231_56-230insA
F46F6.4a.1:c.509-231_509-230insA
HGVSgCHROMOSOME_X:g.10381746dup
Sequence_detailsSMapS_parentSequenceF46F6
Flanking_sequencestttctaatatattcacagtcgttttccaatttttgttactattcaattcc
Mapping_targetF46F6
Type_of_mutationInsertionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00001122
TranscriptF46F6.4c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F6.4c.2:c.56-231_56-230insA
Intron_number4/10
F46F6.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F6.4a.1:c.509-231_509-230insA
Intron_number5/11
F46F6.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F6.4c.1:c.56-231_56-230insA
Intron_number2/8
F46F6.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F6.4d.1:c.56-231_56-230insA
Intron_number2/9
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.6662 VarI1=T
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F46F6.3
[20040130 db] this Allele was previously named snp_F46F6.3
[20090224 db] original Wicks name : F46F6:4366..6076@1009 Psnp=0.6662 VarI1=T
[20090224 db] original Wicks id : yx26c09.s1@71,t,33
MethodSNP_Wicks