WormBase Tree Display for Variation: WBVar00242487

WBVar00242487 Evidence: Paper_evidence: WBPaper00003219
  Name: Public_name: sa96
    Other_name: CE27118:p.Gly288Arg
      F02D10.5.1:c.862G>A
    HGVSg: CHROMOSOME_X:g.13454449C>T
  Sequence_details: SMap: S_parent: Sequence: F02D10
    Flanking_sequences: cagatatctctcctagacaaagcaaattgg gatcctgctcaaaagggtggaatagaaatg
    Mapping_target: F02D10
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00003219
            Person_evidence: WBPerson309
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: JT
    Status: Live
  Affects: Gene: WBGene00001465
    Transcript: F02D10.5.1 (12)
  Genetics: Interpolated_map_position: X 12.5744
    Mapping_data: In_multi_point: 3255
        3256
        3257
  Description: Phenotype: WBPhenotype:0000031 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: slow growing Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000209 Paper_evidence: WBPaper00002315
        Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: The best fit mean cycle time was 15.2 sec as calculated by MESA. Paper_evidence: WBPaper00002315
            Curator_confirmed: WBPerson712
          very short defecation cycle period Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00002315
          Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 20, 25 Paper_evidence: WBPaper00002315
              Curator_confirmed: WBPerson712
      WBPhenotype:0000314 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
      WBPhenotype:0000380 Paper_evidence: WBPaper00002315
        Curator_confirmed: WBPerson712
        Remark: The Exp step was activated less frequently, corresponding to shorter cycle periods. Paper_evidence: WBPaper00002315
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00002315
          Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 20, 25 Paper_evidence: WBPaper00002315
              Curator_confirmed: WBPerson712
      WBPhenotype:0000391 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: often with weak or missing motor program steps Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000651 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Con Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0001641 Paper_evidence: WBPaper00002315
        Curator_confirmed: WBPerson712
        Remark: pBocs were noticibly weaker with the shortened cycle periods. Paper_evidence: WBPaper00002315
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00002315
          Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 20, 25 Paper_evidence: WBPaper00002315
              Curator_confirmed: WBPerson712
      WBPhenotype:0001855 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000659 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: appears to feed normally Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0001791 Paper_evidence: WBPaper00002315
        Curator_confirmed: WBPerson712
        Remark: The defecation cycle was equally altered at 20C and 25C. Paper_evidence: WBPaper00002315
            Curator_confirmed: WBPerson712
        Recessive: Paper_evidence: WBPaper00002315
          Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 20, 25 Paper_evidence: WBPaper00002315
              Curator_confirmed: WBPerson712
  Reference: WBPaper00002315
  Method: Substitution_allele