WormBase Tree Display for Variation: WBVar00239430
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| WBVar00239430 | Name | Public_name | pk2083 | ||||
|---|---|---|---|---|---|---|---|
| Sequence_details | SeqStatus | Pending_curation | |||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00028979 | ||||||
| Laboratory | NL | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00011908 | |||||
| Interactor | WBInteraction000502008 | ||||||
| Genetics | Mapping_data | In_multi_point | 5599 | ||||
| Description | Phenotype | WBPhenotype:0000038 | Paper_evidence | WBPaper00024573 | |||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Defects in structures are easily detected in pash-1 RNAi knock-down animals and to a lesser degree in a pash-1(pk2083) nonsense mutant. Typical defects include protrusion or bursting of the vulva. | Paper_evidence | WBPaper00024573 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000280 | Paper_evidence | WBPaper00024573 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Defects in structures are easily detected in pash-1 RNAi knock-down animals and to a lesser degree in a pash-1(pk2083) nonsense mutant. Typical defects include gaps or absence of the alae. | Paper_evidence | WBPaper00024573 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000745 | Paper_evidence | WBPaper00024573 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | This mutation lead to re-expression of the pkIs2084 reporter in the adult stage; in wild type worms, this expression is silenced. | Paper_evidence | WBPaper00024573 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0001096 | Paper_evidence | WBPaper00024573 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Defects in structures are easily detected in pash-1 RNAi knock-down animals and to a lesser degree in a pash-1(pk2083) nonsense mutant. Typical defects include protrusion or bursting of the vulva. | Paper_evidence | WBPaper00024573 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0001228 | Paper_evidence | WBPaper00024573 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | Defects in structures are easily detected in pash-1 RNAi knock-down animals and to a lesser degree in a pash-1(pk2083) nonsense mutant. Typical defects include gaps or absence of the alae. | Paper_evidence | WBPaper00024573 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Reference | WBPaper00029257 | ||||||
| WBPaper00024573 | |||||||
| Remark | This variation is reported to effect T22A3.5 with a premature stop giving rise to a sterile phenotype (Sup. Table 2) | Paper_evidence | WBPaper00029257 | ||||
| Method | Allele |
