WormBase Tree Display for Variation: WBVar00239316
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WBVar00239316 | Evidence | Paper_evidence | WBPaper00031936 | ||
---|---|---|---|---|---|
Name | Public_name | pk480 | |||
Other_name | pk480df | ||||
F48C11.1.1:c.623+350_1001del | |||||
HGVSg | CHROMOSOME_X:g.13192589_13193474del | ||||
Sequence_details | SMap | S_parent | Sequence | F48C11 | |
Flanking_sequences | gccacagtaaaatctttttattttaacatt | agcgacagatacggggaatattgatctggt | |||
Mapping_target | F48C11 | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00007863 | ||||
WBStrain00028950 | |||||
Laboratory | NL | ||||
Status | Live | ||||
Affects | Gene | WBGene00001668 | |||
Transcript | F48C11.1.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F48C11.1.1:c.623+350_1001del | ||||
cDNA_position | ?-1035 | ||||
CDS_position | ?-1001 | ||||
Protein_position | ?-334 | ||||
Intron_number | 6-8/10 | ||||
Exon_number | 7-9/11 | ||||
Interactor | WBInteraction000502422 | ||||
WBInteraction000502424 | |||||
Isolation | Mutagen | EMS | |||
Genetics (2) | |||||
Description (2) | |||||
Reference | WBPaper00043908 | ||||
WBPaper00031936 | |||||
WBPaper00003465 | |||||
Method | Deletion_allele |