WormBase Tree Display for Variation: WBVar00237765
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WBVar00237765 | Name | Public_name | WBVar00237765 | ||
---|---|---|---|---|---|
Other_name | pas49541 | ||||
F39D8.3b.1:c.880+19_880+20insT | |||||
F39D8.3a.2:c.757+19_757+20insT | |||||
F39D8.3a.1:c.757+19_757+20insT | |||||
HGVSg | CHROMOSOME_X:g.15423508_15423509insT | ||||
Sequence_details | SMap | S_parent | Sequence | F39D8 | |
Flanking_sequences | acttgtgatctgaaatccgacgagctgaggagcaaatttcataatgtttccttgtgagttttttggcgaaagataaccttttgaacttcaaatattcagtgtggatccccgacgaacagtattttcaccttccctacgtcgttcaaaacggatggatagtgtagaggaattcatgaaagttttgaattttactaaaacagattctgacacgttttcacggttatcggatcaaccattgtcgatagagaatgaaaggatcacttatagacagaaattaataggtatgtggaattcagatcg | tttttttttcggtctttcaaaatgcaggtaaaaactactacaatggtgtctacattttttatattttaattctgtttcaataatttgtgtaaaaacattgtaggggtcggaacatgtgaaattgctgtggatttcctcaaaaggtcatatttttcaaaattttggcaattttccaaaaaataaccagcgtggaacttttaccctccaaattttcaaatagggtttcgccggaattcgcgctgtttctaaggctgctaaagggctacaaggggctcagctccagccccgctcgcattgaag | |||
Mapping_target | F39D8 | ||||
Type_of_mutation | Insertion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Status | Live | ||||
Affects | Gene | WBGene00009561 | |||
Transcript | F39D8.3a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.3a.2:c.757+19_757+20insT | ||||
Intron_number | 6/9 | ||||
F39D8.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.3a.1:c.757+19_757+20insT | ||||
Intron_number | 7/10 | ||||
F39D8.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F39D8.3b.1:c.880+19_880+20insT | ||||
Intron_number | 6/8 | ||||
Method | WGS_Pasadena_Quinlan |