WormBase Tree Display for Variation: WBVar00236341

WBVar00236341 Name: Public_name: WBVar00236341
    Other_name: pas48117
      C54D1.3e.1:c.1376+18del
      C54D1.3d.1:c.1106+18del
      C54D1.3b.1:c.1376+18del
      C54D1.3c.1:c.1106+18del
    HGVSg: CHROMOSOME_X:g.7134507del
  Sequence_details: SMap: S_parent: Sequence: C54D1
    Flanking_sequences: ttcccccattccgtgcatcaagcatgttcattttggaggtaattcgcaattttggcaaacttttgcatgtcactgtgtaaactttaaactttcagcgaaatacggttgcttactacggttttcgtgaaaactatttctatgtacgaattggaaagggaagcccctatcgagggtttgagttattgttccaagtggacactaacgaagtttgtaaggaaatttactcacgtcttagagcactcgctgatcgtgatcttgaaaaccggaaacaagaatctatacggttagtgaattctttgg tttttcaaaaaggaatttactttttgttttcaggagaccagaaaggtaagtgaagcgtcaacaaaaacagtctgggaagataattcaagctgacggaaaaacaatttcagtgccagaattgtttttgttcgttgagcattgatttaagtgttcacaggtggtttgccgttcgtctgaggcaagagaaataggtgatcgcaatcaagaacattcgcataggaaaatatatcatctacaactttttttaaagcatatcaccaagcatcaacaaaatcgccaatttcgagatgatgttccaa
    Mapping_target: C54D1
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
    Person: WBPerson6900
    Analysis: WGS_Pasadena_Quinlan
    Status: Live
  Affects: Gene: WBGene00002163
    Transcript: C54D1.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D1.3e.1:c.1376+18del
        Intron_number: 8/18
      C54D1.3d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D1.3d.1:c.1106+18del
        Intron_number: 7/17
      C54D1.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D1.3c.1:c.1106+18del
        Intron_number: 8/16
      C54D1.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D1.3b.1:c.1376+18del
        Intron_number: 9/18
  Method: WGS_Pasadena_Quinlan