WormBase Tree Display for Variation: WBVar00234481
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| WBVar00234481 | Name | Public_name | WBVar00234481 | ||
|---|---|---|---|---|---|
| Other_name | pas46257 | ||||
| F35D11.2a.2:c.-19+1367del | |||||
| F35D11.2a.3:c.-19+1158del | |||||
| F35D11.2b.1:c.6+1367del | |||||
| HGVSg | CHROMOSOME_II:g.4614433del | ||||
| Sequence_details | SMap | S_parent | Sequence | F35D11 | |
| Flanking_sequences | tgacgactagtggtggtgaccatcatctactcttccacacacatttgaatgacgaataatcctgaccgtcgtcctctagccctttccactcatttttttctattcaattcgtttcggttttctgtattttcccccattcatcccctcatacacaaaacaattttcgtttcgatccgctcttcgatcatgcgatttttttttttttttcatatttgtattgattgaaaagacatcggtgtcctaaaaagtttccaagaaatttggaaatttcaaaaacaaaattaaatttttgagcagttg | aaaaaatcatagttgcaaaaatcctaaatccgaattaaaacgtaattttcaagtgcgcgcacaaattcggagttttttacttacaattaattttcacaacttccaagaactttaataaacccttcacatgaggaagtgagcatttcaaaccatttgaaaaacatgagaataagtgcatataaatgtgtcaatactctcgacacctcacttgaattgaaaactacaagtgttctctctcttcactcgaaaccagtgattcatacgatcgttatggtttcgtgtgtttattagattaagta | |||
| Mapping_target | F35D11 | ||||
| Type_of_mutation | Deletion | A | |||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00004122 | |||
| Transcript | F35D11.2a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F35D11.2a.2:c.-19+1367del | ||||
| Intron_number | 1/8 | ||||
| F35D11.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F35D11.2b.1:c.6+1367del | ||||
| Intron_number | 1/6 | ||||
| F35D11.2a.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F35D11.2a.3:c.-19+1158del | ||||
| Intron_number | 1/8 | ||||
| Method | WGS_Pasadena_Quinlan |
