WormBase Tree Display for Gene: WBGene00004122
expand all nodes | collapse all nodes | view schema
| WBGene00004122 | SMap | S_parent | Sequence | F35D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-35 | Person_evidence | WBPerson625 | |||||
| Sequence_name | F35D11.2 | ||||||||
| Molecular_name | F35D11.2a | ||||||||
| F35D11.2a.1 | |||||||||
| CE32647 | |||||||||
| F35D11.2b | |||||||||
| CE31802 | |||||||||
| F35D11.2a.2 | |||||||||
| F35D11.2a.3 | |||||||||
| F35D11.2b.1 | |||||||||
| Other_name | CELE_F35D11.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | pqn-35 | ||||||||
| DB_info | Database | AceView | gene | 2E915 | |||||
| WormQTL | gene | WBGene00004122 | |||||||
| WormFlux | gene | WBGene00004122 | |||||||
| NDB | locus_tag | CELE_F35D11.2 | |||||||
| NCBI | gene | 173800 | |||||||
| RefSeq | protein | NM_001381396.1 | |||||||
| NM_001393052.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF350187 | |||||||
| TrEMBL | UniProtAcc | Q20040 | |||||||
| Q8MQ61 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MQ61 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (152) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066893 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane. Expressed in pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35D11.2a | |||||||
| F35D11.2b | |||||||||
| Corresponding_CDS_history | F35D11.2a:wp88 | ||||||||
| Corresponding_transcript | F35D11.2a.1 | ||||||||
| F35D11.2a.2 | |||||||||
| F35D11.2a.3 | |||||||||
| F35D11.2b.1 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046319 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103327 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014317 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2130 | ||||||||
| Expr1021054 | |||||||||
| Expr1031998 | |||||||||
| Expr1150208 | |||||||||
| Expr2015048 | |||||||||
| Expr2033283 | |||||||||
| Drives_construct | WBCnstr00035681 | ||||||||
| Construct_product | WBCnstr00035681 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (204) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | II | Position | -3.81187 | Error | 0.003663 | |||
| Positive | Positive_clone | F35D11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026929 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
