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WormBase Tree Display for Variation: WBVar00232100

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Name Class

WBVar00232100NamePublic_nameWBVar00232100
Other_namepas43876
cewivar00100968
Y54G11A.1.1:c.997+848G>A
HGVSgCHROMOSOME_II:g.14262177C>T
Sequence_detailsSMapS_parentSequenceY54G11A
Flanking_sequencesAAATAATTTCGAGATTGTTTTGGCGAGAATTCAATTTTTCCGAAAAAAAATATTTTGGCGAAAAAATTAAACTTGATCATTTTTTAAATTTTAGAATTCA
Mapping_targetY54G11A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00013212
TranscriptY54G11A.1.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G11A.1.1:c.997+848G>A
Intron_number6/6
MethodWGS_Pasadena_Quinlan